Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs13211507 chr6:28257377 T/C 0 289 25.6 26.58 9.38 KM Plot
KIRP rs13212093 chr6:27606716 C/T 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13212318 chr6:27688841 A/C 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13212651 chr6:27806985 A/G 1.21E-8 289 25.63 26.37 9.77 KM Plot
KIRP rs13213152 chr6:28349698 A/G 2.0E-8 284 25.57 26.38 9.77 KM Plot
KIRP rs13213986 chr6:28358009 T/A 2.0E-8 284 25.57 26.38 9.77 KM Plot
KIRP rs13215275 chr6:27647509 G/T 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13216117 chr6:27938484 A/G 2.01E-8 288 25.62 26.4 9.77 KM Plot
KIRP rs13217472 chr6:28681415 G/A 2.9E-8 281 25.57 26.37 9.77 KM Plot
KIRP rs13217619 chr6:28306671 T/C 1.38E-8 289 25.6 26.4 9.77 KM Plot
KIRP rs13217984 chr6:28139710 A/T 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13218875 chr6:27884012 C/T 2.21E-8 287 25.62 27.78 9.77 KM Plot
KIRP rs13220495 chr6:26441640 C/T 1.26E-8 289 25.58 29.43 9.77 KM Plot
KIRP rs13220522 chr6:26316295 G/A 9.63E-9 286 25.37 29.87 9.77 KM Plot
KIRP rs13285517 chr9:96601607 G/A 6.2E-6 285 24.73 30.95 13.17 KM Plot